PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C009440P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family Trihelix
Protein Properties Length: 518aa    MW: 59109.1 Da    PI: 7.3436
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C009440P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.44.7e-2997182187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  MELO3C009440P1  97 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMaEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 182
                     8*************************************889*****************************97..66678*******85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd122031.07E-2097162No hitNo description
PROSITE profilePS500906.73797155IPR017877Myb-like domain
PfamPF138375.0E-2097183No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MDDQYPLSDL RHLLSTAPPR PHFPSSSSIP HHDLSSAFRH HHTPYDLIMM MPRDTPLPDF  60
RSDSTTTPSA PIVSAQTVHN AFEPESASIA ADCATARWPR QETLTLLEIR SRLDSKFKEA  120
NQKGPLWDEV SRIMAEEHNY QRSGKKCREK FENLYKYYKK TKEGKAGRQD GKNYRFFRQL  180
EALYGETSNS PSLPDSHFVG DTNLRFQQNG TKNPTASAPM SHEAHQKHYC DSLSLSNTSE  240
FETSASSDGN DDLGSVGVMD NDSMEKRRKK RGGKCWKAKI KQFIDSQMRK LIDKQEAWLE  300
KLMKTLEQKE KERMIRDEEW RRQEVSRMDR ERSFWAKERA WIESRDAALM DALQRLTGRE  360
LRDNNQYNSS PDHGLIVAEH HRNNNENQNE DGSEILNNNT ARELLADNND NYQRKIIDNH  420
GNKKRKENST STTTTTYNLY FQQQTDSSLY SRGGGGPYDG ATHIKEQSPN SSNAGASGGG  480
HVVQDNCFRF LMGEGDQSQS GLWENFGLKL NNGGDRT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818410.0LN681841.1 Cucumis melo genomic scaffold, anchoredscaffold00011.
GenBankLN7132580.0LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008442805.10.0PREDICTED: trihelix transcription factor PTL
SwissprotQ9LZS01e-107PTL_ARATH; Trihelix transcription factor PTL
TrEMBLA0A0A0LEF70.0A0A0A0LEF7_CUCSA; Uncharacterized protein
STRINGGLYMA19G37660.11e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-87Trihelix family protein